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» Computational Quantification of Peptides from LC-MS Data
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BMCBI
2008
166views more  BMCBI 2008»
13 years 6 months ago
QuantPrime - a flexible tool for reliable high-throughput primer design for quantitative PCR
Background: Medium- to large-scale expression profiling using quantitative polymerase chain reaction (qPCR) assays are becoming increasingly important in genomics research. A majo...
Samuel Arvidsson, Miroslaw Kwasniewski, Diego Maur...
COMPLIFE
2006
Springer
13 years 11 months ago
Beating the Noise: New Statistical Methods for Detecting Signals in MALDI-TOF Spectra Below Noise Level
Background: The computer-assisted detection of small molecules by mass spectrometry in biological samples provides a snapshot of thousands of peptides, protein fragments and prote...
Tim O. F. Conrad, Alexander Leichtle, Andre Hageh&...
BMCBI
2010
175views more  BMCBI 2010»
13 years 7 months ago
Global parameter estimation methods for stochastic biochemical systems
Background: The importance of stochasticity in cellular processes having low number of molecules has resulted in the development of stochastic models such as chemical master equat...
Suresh Kumar Poovathingal, Rudiyanto Gunawan
CORR
2004
Springer
100views Education» more  CORR 2004»
13 years 7 months ago
On Spatial Conjunction as Second-Order Logic
Abstract. Spatial conjunction is a powerful construct for reasoning about dynamically allocated data structures, as well as concurrent, distributed and mobile computation. While re...
Viktor Kuncak, Martin C. Rinard
BMCBI
2010
103views more  BMCBI 2010»
13 years 7 months ago
PostMod: sequence based prediction of kinase-specific phosphorylation sites with indirect relationship
Background: Post-translational modifications (PTMs) have a key role in regulating cell functions. Consequently, identification of PTM sites has a significant impact on understandi...
Inkyung Jung, Akihisa Matsuyama, Minoru Yoshida, D...