Abstract. Protein fold recognition is an important step towards understanding protein three-dimensional structures and their functions. A conditional graphical model, i.e. segmenta...
Yan Liu, Jaime G. Carbonell, Peter Weigele, Vanath...
Most tandem mass spectrum identification algorithms use information only from the final spectrum, ignoring precursor information such as peptide retention time (RT). Efforts to exp...
Aaron A. Klammer, Xianhua Yi, Michael J. MacCoss, ...
This paper looks at the nonparametric, multiscale, Markov Random Field (MRF) model and its application in classifying the MeasTex Test Suite. The MeasTex Test Suite is a standard ...
Starting from a graphical data model (a subset of the OMT object model), a skeleton of formal specification can be generated and completed to express several constraints and provi...
Conditional random field (CRF) is a popular graphical model for sequence labeling. The flexibility of CRF poses significant computational challenges for training. Using existing o...