Sciweavers

357 search results - page 34 / 72
» Computing Reachable States for Nonlinear Biological Models
Sort
View
KDD
2008
ACM
243views Data Mining» more  KDD 2008»
16 years 4 months ago
Permu-pattern: discovery of mutable permutation patterns with proximity constraint
Pattern discovery in sequences is an important problem in many applications, especially in computational biology and text mining. However, due to the noisy nature of data, the tra...
Meng Hu, Jiong Yang, Wei Su
ATVA
2005
Springer
132views Hardware» more  ATVA 2005»
15 years 9 months ago
Flat Counter Automata Almost Everywhere!
Abstract. This paper argues that flatness appears as a central notion in the verification of counter automata. A counter automaton is called flat when its control graph can be ...
Jérôme Leroux, Grégoire Sutre
ATVA
2004
Springer
138views Hardware» more  ATVA 2004»
15 years 7 months ago
Providing Automated Verification in HOL Using MDGs
While model checking suffers from the state space explosion problem, theorem proving is quite tedious and impractical for verifying complex designs. In this work, we present a veri...
Tarek Mhamdi, Sofiène Tahar
CMSB
2011
Springer
14 years 3 months ago
Coloured stochastic multilevel multiset rewriting
From the phosphorylation state of a molecule to the volume of a cell, parameters are ubiquitous in systems biology. At the same time, most models involve static or dynamic compart...
Nicolas Oury, Gordon D. Plotkin
ISMB
1993
15 years 5 months ago
Using Dirichlet Mixture Priors to Derive Hidden Markov Models for Protein Families
A Bayesian method for estimating the amino acid distributions in the states of a hidden Markov model (HMM) for a protein familyor the columns of a multiple alignment of that famil...
Michael Brown, Richard Hughey, Anders Krogh, I. Sa...