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CDC
2010
IEEE
144views Control Systems» more  CDC 2010»
13 years 2 months ago
Formal analysis of piecewise affine systems through formula-guided refinement
Abstract-- We present a computational framework for identifying a set of initial states from which all trajectories of a piecewise affine (PWA) system satisfy a Linear Temporal Log...
Boyan Yordanov, Jana Tumova, Calin Belta, Ivana Ce...
BMCBI
2010
115views more  BMCBI 2010»
13 years 7 months ago
Importance of replication in analyzing time-series gene expression data: Corticosteroid dynamics and circadian patterns in rat l
Background: Microarray technology is a powerful and widely accepted experimental technique in molecular biology that allows studying genome wide transcriptional responses. However...
Tung T. Nguyen, Richard R. Almon, Debra C. DuBois,...
BMCBI
2006
109views more  BMCBI 2006»
13 years 7 months ago
GPNN: Power studies and applications of a neural network method for detecting gene-gene interactions in studies of human disease
Background: The identification and characterization of genes that influence the risk of common, complex multifactorial disease primarily through interactions with other genes and ...
Alison A. Motsinger, Stephen L. Lee, George Mellic...
SC
2005
ACM
14 years 1 months ago
A Scalable Distributed Parallel Breadth-First Search Algorithm on BlueGene/L
Many emerging large-scale data science applications require searching large graphs distributed across multiple memories and processors. This paper presents a distributed breadthï¬...
Andy Yoo, Edmond Chow, Keith W. Henderson, Will Mc...
BMCBI
2010
112views more  BMCBI 2010»
13 years 7 months ago
Computational identification of rare codons of Escherichia coli based on codon pairs preference
Background: Codon bias is believed to play an important role in the control of gene expression. In Escherichia coli, some rare codons, which can limit the expression level of exog...
Xianming Wu, Songfeng Wu, Dong Li, Jiyang Zhang, L...