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» Computing Through Gene Assembly
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SAC
2009
ACM
14 years 2 months ago
Measuring coherence between electronic and manual annotations in biological databases
The use of controlled structured vocabularies for annotation purposes, such as the Gene Ontology (GO) is currently one of the strategies to cope with the increasingly cumbersome t...
Catia Pesquita, Daniel Faria, Francisco M. Couto
SAC
2010
ACM
14 years 2 months ago
Web-based graphical querying of databases through an ontology: the Wonder system
Biological scientists have made large amounts of data available on the Web, which can be accessed by canned or precomputed queries presented via web forms. To satisfy further info...
Diego Calvanese, C. Maria Keet, Werner Nutt, Maria...
BMCBI
2008
126views more  BMCBI 2008»
13 years 7 months ago
Relating gene expression data on two-component systems to functional annotations in Escherichia coli
Background: Obtaining physiological insights from microarray experiments requires computational techniques that relate gene expression data to functional information. Traditionall...
Anne M. Denton, Jianfei Wu, Megan K. Townsend, Pre...
CSB
2005
IEEE
189views Bioinformatics» more  CSB 2005»
14 years 1 months ago
Learning Yeast Gene Functions from Heterogeneous Sources of Data Using Hybrid Weighted Bayesian Networks
We developed a machine learning system for determining gene functions from heterogeneous sources of data sets using a Weighted Naive Bayesian Network (WNB). The knowledge of gene ...
Xutao Deng, Huimin Geng, Hesham H. Ali
BMCBI
2008
128views more  BMCBI 2008»
13 years 7 months ago
In silico analysis of expressed sequence tags from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer
Background: The analysis of expressed sequence tags (EST) offers a rapid and cost effective approach to elucidate the transcriptome of an organism, but requires several computatio...
Shivashankar H. Nagaraj, Robin B. Gasser, Alasdair...