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» Computing a Representation of the Local Environment
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ISMB
1996
13 years 8 months ago
A Knowledge-Based Method for Protein Structure Refinement and Prediction
The native conformation of a protein, in a given environment, is determined entirely by the various interatomic interactions dictated by the amino acid sequence (1-3). We describe...
Shankar Subramaniam, David K. Tcheng, James M. Fen...
ICDCS
2010
IEEE
13 years 7 months ago
Resource Allocation in Distributed Mixed-Criticality Cyber-Physical Systems
—Large-scale distributed cyber-physical systems will have many sensors/actuators (each with local micro-controllers), and a distributed communication/computing backbone with mult...
Karthik Lakshmanan, Dionisio de Niz, Ragunathan Ra...
BMCBI
2007
195views more  BMCBI 2007»
13 years 7 months ago
NeuroTerrain - a client-server system for browsing 3D biomedical image data sets
Background: Three dimensional biomedical image sets are becoming ubiquitous, along with the canonical atlases providing the necessary spatial context for analysis. To make full us...
Carl Gustafson, William J. Bug, Jonathan Nissanov
BMCBI
2008
211views more  BMCBI 2008»
13 years 7 months ago
CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
Svetlin Manavski, Giorgio Valle
GRID
2006
Springer
13 years 7 months ago
The Palantir Grid Meta-Information System
Grids allow large scale resource-sharing across different administrative domains. Those diverse resources are likely to join or quit the Grid at any moment or possibly to break dow...
Francesc Guim, Ivan Rodero, M. Tomas, Julita Corba...