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    BMCBI
    2005
    132views more  BMCBI 2005»
    Kalign - an accurate and fast multiple sequence alignment algorithm
    13 years 8 months ago
    Kalign - an accurate and fast multiple sequence alignment algorithm
    Download  www.biomedcentral.com
    Background: The alignment of multiple protein sequences is a fundamental step in the analysis of biological data. It has traditionally been applied to analyzing protein families f...
    Timo Lassmann, Erik L. L. Sonnhammer
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    BMCBI
    2005
    152views more  BMCBI 2005»
    Improved profile HMM performance by assessment of critical algorithmic features in SAM and HMMER
    13 years 8 months ago
    Improved profile HMM performance by assessment of critical algorithmic features in SAM and HMMER
    Download  www.biomedcentral.com
    Background: Profile hidden Markov model (HMM) techniques are among the most powerful methods for protein homology detection. Yet, the critical features for successful modelling ar...
    Markus Wistrand, Erik L. L. Sonnhammer
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    DAC
    2009
    ACM
    118views Computer Architecture» more  DAC 2009»
    ILP-based pin-count aware design methodology for microfluidic biochips
    14 years 9 months ago
    ILP-based pin-count aware design methodology for microfluidic biochips
    Download  cc.ee.ntu.edu.tw
    Digital microfluidic biochips have emerged as a popular alternative for laboratory experiments. To make the biochip feasible for practical applications, pin-count reduction is a k...
    Cliff Chiung-Yu Lin, Yao-Wen Chang
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    DAC
    2006
    ACM
    160views Computer Architecture» more  DAC 2006»
    BoxRouter: a new global router based on box expansion and progressive ILP
    14 years 9 months ago
    BoxRouter: a new global router based on box expansion and progressive ILP
    Download  www.cerc.utexas.edu
    In this paper, we propose a new global router, BoxRouter, powered by the concept of box expansion and progressive integer linear programming (ILP). BoxRouter first uses a simple P...
    Minsik Cho, David Z. Pan
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    KDD
    2003
    ACM
    205views Data Mining» more  KDD 2003»
    The data mining approach to automated software testing
    14 years 9 months ago
    The data mining approach to automated software testing
    Download  www2.cs.uh.edu
    In today's industry, the design of software tests is mostly based on the testers' expertise, while test automation tools are limited to execution of pre-planned tests on...
    Mark Last, Menahem Friedman, Abraham Kandel
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