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» Computing with Infinitely Many Processes
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BMCBI
2008
118views more  BMCBI 2008»
13 years 9 months ago
PseudoGeneQuest - Service for identification of different pseudogene types in the human genome
Background: Pseudogenes, nonfunctional copies of genes, evolve fast due the lack of evolutionary pressures and thus appear in several different forms. PseudoGeneQuest is an online...
Csaba P. Ortutay, Mauno Vihinen
BMCBI
2007
106views more  BMCBI 2007»
13 years 9 months ago
Mining prokaryotic genomes for unknown amino acids: a stop-codon-based approach
Background: Selenocysteine and pyrrolysine are the 21st and 22nd amino acids, which are genetically encoded by stop codons. Since a number of microbial genomes have been completel...
Masashi Fujita, Hisaaki Mihara, Susumu Goto, Nobuy...
CCE
2008
13 years 9 months ago
Dynamic scheduling of multiproduct pipelines with multiple delivery due dates
Scheduling product batches in pipelines is a very complex task with many constraints to be considered. Several papers have been published on the subject during the last decade. Mo...
Diego C. Cafaro, Jaime Cerdá
BMCBI
2006
93views more  BMCBI 2006»
13 years 8 months ago
A summarization approach for Affymetrix GeneChip data using a reference training set from a large, biologically diverse database
Background: Many of the most popular pre-processing methods for Affymetrix expression arrays, such as RMA, gcRMA, and PLIER, simultaneously analyze data across a set of predetermi...
Simon Katz, Rafael A. Irizarry, Xue Lin, Mark Trip...
AIM
2005
13 years 8 months ago
If Not Turing's Test, Then What?
If it is true that good problems produce good science, then it will be worthwhile to identify good problems, and even more worthwhile to discover the attributes that make them goo...
Paul R. Cohen