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BMCBI
2008
167views more  BMCBI 2008»
13 years 8 months ago
Not proper ROC curves as new tool for the analysis of differentially expressed genes in microarray experiments
Background: Most microarray experiments are carried out with the purpose of identifying genes whose expression varies in relation with specific conditions or in response to enviro...
Stefano Parodi, Vito Pistoia, Marco Muselli
BMCBI
2011
13 years 3 months ago
Taxon ordering in phylogenetic trees: a workbench test
Background: Phylogenetic trees are an important tool for representing evolutionary relationships among organisms. In a phylogram or chronogram, the ordering of taxa is not conside...
Francesco Cerutti, Luigi Bertolotti, Tony L. Goldb...
ICDM
2005
IEEE
122views Data Mining» more  ICDM 2005»
14 years 2 months ago
ViVo: Visual Vocabulary Construction for Mining Biomedical Images
Given a large collection of medical images of several conditions and treatments, how can we succinctly describe the characteristics of each setting? For example, given a large col...
Arnab Bhattacharya, Vebjorn Ljosa, Jia-Yu Pan, Mar...
BMCBI
2010
165views more  BMCBI 2010»
13 years 8 months ago
Multivariate meta-analysis of proteomics data from human prostate and colon tumours
Background: There is a vast need to find clinically applicable protein biomarkers as support in cancer diagnosis and tumour classification. In proteomics research, a number of met...
Lina Hultin Rosenberg, Bo Franzén, Gert Aue...
TLDI
2010
ACM
218views Formal Methods» more  TLDI 2010»
14 years 5 months ago
Pointwise generalized algebraic data types
In the GADT (Generalized Algebraic Data Types) type system, a pattern-matching branch can draw type information from both the scrutinee type and the data constructor type. Even th...
Chuan-kai Lin, Tim Sheard