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    » Conserved RNA Pseudoknots
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    BMCBI
    2007
    55views more  BMCBI 2007»
    Inference of miRNA targets using evolutionary conservation and pathway analysis
    13 years 7 months ago
    Inference of miRNA targets using evolutionary conservation and pathway analysis
    Download  www.bioinf.uni-leipzig.de
    Dimos Gaidatzis, Erik van Nimwegen, Jean Hausser, ...
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    CANDC
    1999
    ACM
    136views Emerging Technology» more  CANDC 1999»
    Automatic Detection of Conserved Base Pairing Patterns in RNA Virus Genomes
    13 years 7 months ago
    Automatic Detection of Conserved Base Pairing Patterns in RNA Virus Genomes
    Download  www.tbi.univie.ac.at
    Ivo L. Hofacker, Peter F. Stadler
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    IPPS
    2009
    IEEE
    95views Distributed And Parallel Com...» more  IPPS 2009»
    Dynamic parallelization for RNA structure comparison
    14 years 2 months ago
    Dynamic parallelization for RNA structure comparison
    Download  www.hicomb.org
    In this paper we describe the parallelization of a dynamic programming algorithm used to find common RNA secondary structures including pseudoknots and similar structures. The se...
    Eric Snow, Eric Aubanel, Patricia Evans
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    JCB
    2006
    126views more  JCB 2006»
    Combinatorics of Saturated Secondary Structures of RNA
    13 years 7 months ago
    Combinatorics of Saturated Secondary Structures of RNA
    Download  clavius.bc.edu
    Following Zuker (1986), a saturated secondary structure for a given RNA sequence is a secondary structure such that no base pair can be added without violating the definition of s...
    P. Clote
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    BMCBI
    2008
    83views more  BMCBI 2008»
    An efficient genetic algorithm for structural RNA pairwise alignment and its application to non-coding RNA discovery in yeast
    13 years 7 months ago
    An efficient genetic algorithm for structural RNA pairwise alignment and its application to non-coding RNA discovery in yeast
    Download  www.biomedcentral.com
    Background: Aligning RNA sequences with low sequence identity has been a challenging problem since such a computation essentially needs an algorithm with high complexities for tak...
    Akito Taneda
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