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    » Consistency of Sequence-Based Gene Clusters
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    IPPS
    2006
    IEEE
    100views Distributed And Parallel Com...» more  IPPS 2006»
    Parallel implementation of a quartet-based algorithm for phylogenetic analysis
    14 years 2 months ago
    Parallel implementation of a quartet-based algorithm for phylogenetic analysis
    Download  www.hicomb.org
    This paper describes a parallel implementation of our recently developed algorithm for phylogenetic analysis on the IBM BlueGene/L cluster [15]. This algorithm constructs evolutio...
    Bing Bing Zhou, Daniel Chu, Monther Tarawneh, Ping...
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    CBMS
    2005
    IEEE
    136views Medical Imaging» more  CBMS 2005»
    An Ontology-Driven Clustering Method for Supporting Gene Expression Analysis
    14 years 2 months ago
    An Ontology-Driven Clustering Method for Supporting Gene Expression Analysis
    Download  lhncbc.nlm.nih.gov
    The Gene Ontology (GO) is an important knowledge resource for biologists and bioinformaticians. This paper explores the integration of similarity information derived from GO into ...
    Haiying Wang, Francisco Azuaje, Olivier Bodenreide...
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    BMCBI
    2008
    202views more  BMCBI 2008»
    Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data
    13 years 8 months ago
    Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data
    Download  www.biomedcentral.com
    Background: Integrating data from multiple global assays and curated databases is essential to understand the spatiotemporal interactions within cells. Different experiments measu...
    Yuji Zhang, Jianhua Xuan, Benildo de los Reyes, Ro...
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    NIPS
    2003
    140views Information Technology» more  NIPS 2003»
    Gene Expression Clustering with Functional Mixture Models
    13 years 10 months ago
    Gene Expression Clustering with Functional Mixture Models
    Download  books.nips.cc
    We propose a functional mixture model for simultaneous clustering and alignment of sets of curves measured on a discrete time grid. The model is specifically tailored to gene exp...
    Darya Chudova, Christopher E. Hart, Eric Mjolsness...
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    NAR
    2000
    152views more  NAR 2000»
    ASDB: database of alternatively spliced genes
    13 years 8 months ago
    ASDB: database of alternatively spliced genes
    Download  cmbi.bjmu.edu.cn
    Version 2.1 of ASDB (Alternative Splicing Data Base) contains 1922 protein and 2486 DNA sequences. The protein entries from SWISS-PROT are joined into clusters corresponding to al...
    I. Dralyuk, Michael Brudno, Mikhail S. Gelfand, Ma...
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