Abstract. We apply the Boyer–Moore technique to compressed pattern matching for text string described in terms of collage system, which is a formal framework that captures variou...
We show an ecient pattern matching algorithm for strings that are succinctly described in terms of straight-line programs, in which the constants are symbols and the only operati...
—A recent paper [1] proposed a provably optimal polynomial time method for performing near-isometric point pattern matching by means of exact probabilistic inference in a chordal...
We present solutions for the k-mismatch pattern matching problem with don’t cares. Given a text t of length n and a pattern p of length m with don’t care symbols and a bound k...
Abstract. Contact maps are a model to capture the core information in the structure of biological molecules, e.g., proteins. A contact map consists of an ordered set ¡ of elements...