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» Constraint Based Methods for Biological Sequence Analysis
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TOG
2008
127views more  TOG 2008»
15 years 3 months ago
Animating responsive characters with dynamic constraints in near-unactuated coordinates
This paper presents a technique to enhance a kinematically controlled virtual character with a generic class of dynamic responses to small perturbations. Given an input motion seq...
Yuting Ye, C. Karen Liu
HPDC
2010
IEEE
15 years 4 months ago
Modeling sequence and function similarity between proteins for protein functional annotation
A common task in biological research is to predict function for proteins by comparing sequences between proteins of known and unknown function. This is often done using pair-wise ...
Roger Higdon, Brenton Louie, Eugene Kolker
BMCBI
2006
202views more  BMCBI 2006»
15 years 3 months ago
DWARF - a data warehouse system for analyzing protein families
Background: The emerging field of integrative bioinformatics provides the tools to organize and systematically analyze vast amounts of highly diverse biological data and thus allo...
Markus Fischer, Quan K. Thai, Melanie Grieb, J&uum...
SCAM
2008
IEEE
15 years 10 months ago
Automated Detection of Code Vulnerabilities Based on Program Analysis and Model Checking
Ensuring the correctness and reliability of software systems is one of the main problems in software development. Model checking, a static analysis method, is preponderant in impr...
Lei Wang, Qiang Zhang, PengChao Zhao
BMCBI
2008
137views more  BMCBI 2008»
15 years 4 months ago
Evading the annotation bottleneck: using sequence similarity to search non-sequence gene data
Background: Non-sequence gene data (images, literature, etc.) can be found in many different public databases. Access to these data is mostly by text based methods using gene name...
Michael J. Gilchrist, Mikkel B. Christensen, Richa...