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» Constraint Based Methods for Biological Sequence Analysis
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CAV
2009
Springer
134views Hardware» more  CAV 2009»
16 years 4 months ago
Predecessor Sets of Dynamic Pushdown Networks with Tree-Regular Constraints
Abstract. Dynamic Pushdown Networks (DPNs) are a model for parallel programs with (recursive) procedures and process creation. The goal of this paper is to develop generic techniqu...
Alexander Wenner, Markus Müller-Olm, Peter La...
BMCBI
2008
195views more  BMCBI 2008»
15 years 4 months ago
Goldsurfer2 (Gs2): A comprehensive tool for the analysis and visualization of genome wide association studies
Background: Genome wide association (GWA) studies are now being widely undertaken aiming to find the link between genetic variations and common diseases. Ideally, a well-powered G...
Fredrik Pettersson, Andrew P. Morris, Michael R. B...
BMCBI
2010
129views more  BMCBI 2010»
15 years 4 months ago
Uncovering packaging features of co-regulated modules based on human protein interaction and transcriptional regulatory networks
Background: Network co-regulated modules are believed to have the functionality of packaging multiple biological entities, and can thus be assumed to coordinate many biological fu...
Lina Chen, Hong Wang, Liangcai Zhang, Wan Li, Qian...
WABI
2009
Springer
142views Bioinformatics» more  WABI 2009»
15 years 10 months ago
Back-Translation for Discovering Distant Protein Homologies
Background: Frameshift mutations in protein-coding DNA sequences produce a drastic change in the resulting protein sequence, which prevents classic protein alignment methods from ...
Marta Gîrdea, Laurent Noé, Gregory Ku...
AUTOMATICA
2005
108views more  AUTOMATICA 2005»
15 years 3 months ago
Enlarging the domain of attraction of MPC controllers
This paper presents a method for enlarging the domain of attraction of nonlinear model predictive control (MPC). The usual way of guaranteeing stability of nonlinear MPC is to add...
Daniel Limón, T. Alamo, Eduardo F. Camacho