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» Constraint Based Methods for Biological Sequence Analysis
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ICDE
2011
IEEE
281views Database» more  ICDE 2011»
14 years 7 months ago
Declarative analysis of noisy information networks
—There is a growing interest in methods for analyzing data describing networks of all types, including information, biological, physical, and social networks. Typically the data ...
Walaa Eldin Moustafa, Galileo Namata, Amol Deshpan...
TCBB
2010
106views more  TCBB 2010»
14 years 10 months ago
Quantifying the Degree of Self-Nestedness of Trees: Application to the Structural Analysis of Plants
In this paper we are interested in the problem of approximating trees by trees with a particular self-nested structure. Self-nested trees are such that all their subtrees of a give...
Christophe Godin, Pascal Ferraro
BMCBI
2011
14 years 11 months ago
AnyExpress: Integrated toolkit for analysis of cross-platform gene expression data using a fast interval matching algorithm
Background: Cross-platform analysis of gene express data requires multiple, intricate processes at different layers with various platforms. However, existing tools handle only a s...
Jihoon Kim, Kiltesh Patel, Hyunchul Jung, Winston ...
ISQED
2006
IEEE
116views Hardware» more  ISQED 2006»
15 years 10 months ago
Probabilistic Delay Budgeting for Soft Realtime Applications
Unlike their hard realtime counterparts, soft realtime applications are only expected to guarantee their ”expected delay” over input data space. This paradigm shift calls for ...
Soheil Ghiasi, Po-Kuan Huang
BMCBI
2005
99views more  BMCBI 2005»
15 years 4 months ago
CGH-Profiler: Data mining based on genomic aberration profiles
Background: CGH-Profiler is a program that supports the analysis of genomic aberrations measured by Comparative Genomic Hybridisation (CGH). Comparative genomic hybridisation (CGH...
Falk Schubert, Bernhard Tausch, Stefan Joos, Rolan...