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» Constraint Based Methods for Biological Sequence Analysis
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WSCG
2003
310views more  WSCG 2003»
15 years 5 months ago
Effective Shadow Detection in Traffic Monitoring Applications
This paper presents work we have done in detecting moving shadows in the context of an outdoor traffic scene for visual surveillance purposes. The algorithm just exploits some for...
Alessandro Bevilacqua
CSB
2004
IEEE
158views Bioinformatics» more  CSB 2004»
15 years 7 months ago
Algorithms for Association Study Design Using a Generalized Model of Haplotype Conservation
There is considerable interest in computational methods to assist in the use of genetic polymorphism data for locating disease-related genes. Haplotypes, contiguous sets of correl...
Russell Schwartz
BMCBI
2010
176views more  BMCBI 2010»
15 years 3 months ago
TargetSpy: a supervised machine learning approach for microRNA target prediction
Background: Virtually all currently available microRNA target site prediction algorithms require the presence of a (conserved) seed match to the 5' end of the microRNA. Recen...
Martin Sturm, Michael Hackenberg, David Langenberg...
WABI
2005
Springer
120views Bioinformatics» more  WABI 2005»
15 years 9 months ago
Multiple Structural RNA Alignment with Lagrangian Relaxation
In contrast to proteins, many classes of functionally related RNA molecules show a rather weak sequence conservation but instead a fairly well conserved secondary structure. Hence ...
Markus Bauer, Gunnar W. Klau, Knut Reinert
BMCBI
2007
109views more  BMCBI 2007»
15 years 3 months ago
A cis-regulatory logic simulator
Background: A major goal of computational studies of gene regulation is to accurately predict the expression of genes based on the cis-regulatory content of their promoters. The d...
Robert D. Zeigler, Jason Gertz, Barak A. Cohen