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CONSTRAINTS
2008
121views more  CONSTRAINTS 2008»
13 years 8 months ago
Modeling Biological Networks by Action Languages via Answer Set Programming
We describe an approach to modeling biological networks by action languages via answer set programming. To this end, we propose an action language for modeling biological networks...
Steve Dworschak, Susanne Grell, Victoria J. Nikifo...
CP
2009
Springer
14 years 8 months ago
Coalition Structure Generation Utilizing Compact Characteristic Function Representations
This paper presents a new way of formalizing the Coalition Structure Generation problem (CSG), so that we can apply constraint optimization techniques to it. Forming effective coal...
Naoki Ohta, Vincent Conitzer, Ryo Ichimura, Yuko S...
CORR
2010
Springer
142views Education» more  CORR 2010»
13 years 6 months ago
HyperANF: Approximating the Neighbourhood Function of Very Large Graphs on a Budget
The neighbourhood function NG(t) of a graph G gives, for each t ∈ N, the number of pairs of nodes x, y such that y is reachable from x in less that t hops. The neighbourhood fun...
Paolo Boldi, Marco Rosa, Sebastiano Vigna
IPPS
2009
IEEE
14 years 2 months ago
Exploring FPGAs for accelerating the phylogenetic likelihood function
Driven by novel biological wet lab techniques such as pyrosequencing there has been an unprecedented molecular data explosion over the last 2-3 years. The growth of biological seq...
Nikolaos Alachiotis, Euripides Sotiriades, Apostol...
DAC
2002
ACM
14 years 8 months ago
An integer linear programming based approach for parallelizing applications in On-chip multiprocessors
With energy consumption becoming one of the first-class optimization parameters in computer system design, compilation techniques that consider performance and energy simultaneous...
Ismail Kadayif, Mahmut T. Kandemir, Ugur Sezer