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BMCBI
2007
123views more  BMCBI 2007»
13 years 10 months ago
Heritable clustering and pathway discovery in breast cancer integrating epigenetic and phenotypic data
Background: In order to recapitulate tumor progression pathways using epigenetic data, we developed novel clustering and pathway reconstruction algorithms, collectively referred t...
Zailong Wang, Pearlly Yan, Dustin P. Potter, Chari...
BMCBI
2006
118views more  BMCBI 2006»
13 years 10 months ago
Statistical analysis of an RNA titration series evaluates microarray precision and sensitivity on a whole-array basis
Background: Concerns are often raised about the accuracy of microarray technologies and the degree of cross-platform agreement, but there are yet no methods which can unambiguousl...
Andrew J. Holloway, Alicia Oshlack, Dileepa S. Diy...
BMCBI
2007
103views more  BMCBI 2007»
13 years 10 months ago
Systems biology approach for mapping the response of human urothelial cells to infection by Enterococcus faecalis
Background: To better understand the response of urinary epithelial (urothelial) cells to Enterococcus faecalis, a uropathogen that exhibits resistance to multiple antibiotics, a ...
Mikhail G. Dozmorov, Kimberly D. Kyker, Ricardo Sa...
MICCAI
2008
Springer
14 years 11 months ago
MR Brain Tissue Classification Using an Edge-Preserving Spatially Variant Bayesian Mixture Model
In this paper, a spatially constrained mixture model for the segmentation of MR brain images is presented. The novelty of this work is a new, edge preserving, smoothness prior whic...
Giorgos Sfikas, Christophoros Nikou, Nikolas P. ...
ICML
2009
IEEE
14 years 10 months ago
Multi-class image segmentation using conditional random fields and global classification
A key aspect of semantic image segmentation is to integrate local and global features for the prediction of local segment labels. We present an approach to multi-class segmentatio...
Nils Plath, Marc Toussaint, Shinichi Nakajima