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» Constructing Computer Virus Phylogenies
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IJBRA
2006
92views more  IJBRA 2006»
13 years 7 months ago
Jumpstarting phylogenetic analysis
: Phylogenetic analysis is a central tool in studies of comparative genomics. When a new region of DNA is isolated and sequenced, researchers are often forced to throw away months ...
Jesse Mecham, Mark J. Clement, Quinn Snell, Todd F...
MOBICOM
2006
ACM
14 years 1 months ago
Analysis and implications of student contact patterns derived from campus schedules
Characterizing mobility or contact patterns in a campus environment is of interest for a variety of reasons. Existing studies of these patterns can be classified into two basic a...
Vikram Srinivasan, Mehul Motani, Wei Tsang Ooi
METMBS
2004
140views Mathematics» more  METMBS 2004»
13 years 9 months ago
New Techniques for Generation and Analysis of Evolutionary Trees
We introduce new distance measures for the construction and analysis of phylogenies, focusing on thioredoxin-fold proteins. Our distance measures for tree construction are based o...
Chang Wang, Stephen D. Scott, Qingping Tao, Dmitri...
BMCBI
2010
135views more  BMCBI 2010»
13 years 8 months ago
GIGA: a simple, efficient algorithm for gene tree inference in the genomic age
Background: Phylogenetic relationships between genes are not only of theoretical interest: they enable us to learn about human genes through the experimental work on their relativ...
Paul D. Thomas
RECOMB
1997
Springer
14 years 1 days ago
On the complexity and approximation of syntenic distance
The paper studies the computational complexity and approximation algorithms for a new evolutionary distance between multi-chromosomal genomes introduced recently by Ferretti, Nade...
Bhaskar DasGupta, Tao Jiang, Sampath Kannan, Ming ...