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» Constructing a Calculus of Programs
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BMCBI
2010
133views more  BMCBI 2010»
15 years 2 months ago
Consolidating metabolite identifiers to enable contextual and multi-platform metabolomics data analysis
Background: Analysis of data from high-throughput experiments depends on the availability of well-structured data that describe the assayed biomolecules. Procedures for obtaining ...
Henning Redestig, Miyako Kusano, Atsushi Fukushima...
BMCBI
2008
141views more  BMCBI 2008»
15 years 2 months ago
The development of PIPA: an integrated and automated pipeline for genome-wide protein function annotation
Background: Automated protein function prediction methods are needed to keep pace with high-throughput sequencing. With the existence of many programs and databases for inferring ...
Chenggang Yu, Nela Zavaljevski, Valmik Desai, Seth...
BMCBI
2010
198views more  BMCBI 2010»
15 years 2 months ago
ClustalXeed: a GUI-based grid computation version for high performance and terabyte size multiple sequence alignment
Background: There is an increasing demand to assemble and align large-scale biological sequence data sets. The commonly used multiple sequence alignment programs are still limited...
Taeho Kim, Hyun Joo
BMCBI
2006
150views more  BMCBI 2006»
15 years 2 months ago
CGAT: a comparative genome analysis tool for visualizing alignments in the analysis of complex evolutionary changes between clos
Background: The recent accumulation of closely related genomic sequences provides a valuable resource for the elucidation of the evolutionary histories of various organisms. Howev...
Ikuo Uchiyama, Toshio Higuchi, Ichizo Kobayashi
JOT
2007
124views more  JOT 2007»
15 years 2 months ago
Displaying Updated Stock Quotes
This paper describes how to extract stock quote data and display it with a dynamic update (using free, but delayed data streams). As a part of the architecture of the program, we ...
Douglas Lyon