The declarative modeling language Alloy and its automatic analyzer provide an effective tool-set for building designs of systems and checking their properties. The Alloy Analyzer p...
Background: The identification of transcription factor binding sites is difficult since they are only a small number of nucleotides in size, resulting in large numbers of false po...
Matthew S. Hestand, Michiel van Galen, Michel P. V...
This paper introduces a new hybrid method for efficiently integrating Pseudo-Boolean (PB) constraints into generic SAT solvers in order to solve PB satisfiability and optimization...
Background: Gene expression programs depend on recognition of cis elements in promoter region of target genes by transcription factors (TFs), but how TFs regulate gene expression ...
In this paper, we propose solutions to real time simulation and interaction of deformable objects in virtual reality. Firstly, we present LEM - Long Element Method, a method creat...