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» Contextual alignment of biological sequences
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CIBCB
2007
IEEE
14 years 2 months ago
An Experimental Evaluation of Inversion-and Transposition-Based Genomic Distances through Simulations
— Rearrangements of genes and other syntenic blocks have become a topic of intensive study by phylogenists, comparative genomicists, and computational biologists: they are a feat...
Moulik Kothari, Bernard M. E. Moret
BMCBI
2011
12 years 11 months ago
Proteinortho: Detection of (Co-)Orthologs in Large-Scale Analysis
Background: Orthology analysis is an important part of data analysis in many areas of bioinformatics such as comparative genomics and molecular phylogenetics. The ever-increasing ...
Marcus Lechner, Sven Findeiß, Lydia Steiner,...
CCS
2008
ACM
13 years 9 months ago
Privacy oracle: a system for finding application leaks with black box differential testing
We describe the design and implementation of Privacy Oracle, a system that reports on application leaks of user information via the network traffic that they send. Privacy Oracle ...
Jaeyeon Jung, Anmol Sheth, Ben Greenstein, David W...
BMCBI
2008
123views more  BMCBI 2008»
13 years 7 months ago
PocketMatch: A new algorithm to compare binding sites in protein structures
Background: Recognizing similarities and deriving relationships among protein molecules is a fundamental requirement in present-day biology. Similarities can be present at various...
Kalidas Yeturu, Nagasuma Chandra

Publication
303views
12 years 5 months ago
Evolutionary synthesis of analog networks
he significant increase in the available computational power that took place in recent decades has been accompanied by a growing interest in the application of the evolutionary ap...
Claudio Mattiussi