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HPDC
2010
IEEE
13 years 9 months ago
Scalability of communicators and groups in MPI
As the number of cores inside compute clusters continues to grow, the scalability of MPI (Message Passing Interface) is important to ensure that programs can continue to execute o...
Humaira Kamal, Seyed M. Mirtaheri, Alan Wagner
IPPS
2010
IEEE
13 years 5 months ago
Designing high-performance and resilient message passing on InfiniBand
Abstract--Clusters featuring the InfiniBand interconnect are continuing to scale. As an example, the "Ranger" system at the Texas Advanced Computing Center (TACC) include...
Matthew J. Koop, Pavel Shamis, Ishai Rabinovitz, D...
SAC
2009
ACM
14 years 2 months ago
GTfold: a scalable multicore code for RNA secondary structure prediction
The prediction of the correct secondary structures of large RNAs is one of the unsolved challenges of computational molecular biology. Among the major obstacles is the fact that a...
Amrita Mathuriya, David A. Bader, Christine E. Hei...
IEEEPACT
2009
IEEE
14 years 2 months ago
Quantifying the Potential of Program Analysis Peripherals
Abstract—As programmers are asked to manage more complicated parallel machines, it is likely that they will become increasingly dependent on tools such as multi-threaded data rac...
Mohit Tiwari, Shashidhar Mysore, Timothy Sherwood
IPPS
2005
IEEE
14 years 1 months ago
Power and Energy Profiling of Scientific Applications on Distributed Systems
Power consumption is a troublesome design constraint for emergent systems such as IBM’s BlueGene /L. If current trends continue, future petaflop systems will require 100 megawat...
Xizhou Feng, Rong Ge, Kirk W. Cameron