As the number of cores inside compute clusters continues to grow, the scalability of MPI (Message Passing Interface) is important to ensure that programs can continue to execute o...
Abstract--Clusters featuring the InfiniBand interconnect are continuing to scale. As an example, the "Ranger" system at the Texas Advanced Computing Center (TACC) include...
Matthew J. Koop, Pavel Shamis, Ishai Rabinovitz, D...
The prediction of the correct secondary structures of large RNAs is one of the unsolved challenges of computational molecular biology. Among the major obstacles is the fact that a...
Amrita Mathuriya, David A. Bader, Christine E. Hei...
Abstract—As programmers are asked to manage more complicated parallel machines, it is likely that they will become increasingly dependent on tools such as multi-threaded data rac...
Power consumption is a troublesome design constraint for emergent systems such as IBM’s BlueGene /L. If current trends continue, future petaflop systems will require 100 megawat...