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» Creating a Protein Ontology Resource
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COMMA
2006
13 years 9 months ago
Towards Representing and Querying Arguments on the Semantic Web
This paper demonstrates the potential of the Semantic Web as a platform for representing, navigating and processing arguments on a global scale. We use the RDF Schema (RDFS) ontolo...
Iyad Rahwan, P. V. Sakeer
BMCBI
2006
180views more  BMCBI 2006»
13 years 7 months ago
The Gaggle: An open-source software system for integrating bioinformatics software and data sources
Background: Systems biologists work with many kinds of data, from many different sources, using a variety of software tools. Each of these tools typically excels at one type of an...
Paul T. Shannon, David J. Reiss, Richard Bonneau, ...
ITNG
2008
IEEE
14 years 2 months ago
GlycoVault: A Bioinformatics Infrastructure for Glycan Pathway Visualization, Analysis and Modeling
Glycan biosynthesis is the process by which glycans are built in the cells. Information about the process is available from several Web accessible databases, published papers, exp...
Shravya Nimmagadda, Amrita Basu, Matthew Eavenson,...
BMCBI
2008
127views more  BMCBI 2008»
13 years 7 months ago
AMMO-Prot: amine system project 3D-model finder
Background: Amines are biogenic amino acid derivatives, which play pleiotropic and very important yet complex roles in animal physiology. For many other relevant biomolecules, bio...
Ismael Navas Delgado, Raúl Montañez,...
BMCBI
2007
218views more  BMCBI 2007»
13 years 7 months ago
Annotation and query of tissue microarray data using the NCI Thesaurus
Background: The Stanford Tissue Microarray Database (TMAD) is a repository of data serving a consortium of pathologists and biomedical researchers. The tissue samples in TMAD are ...
Nigam H. Shah, Daniel L. Rubin, Inigo Espinosa, Ke...