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» Cross-Platform Analysis with Binarized Gene Expression Data
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BMCBI
2007
152views more  BMCBI 2007»
15 years 6 months ago
Difference-based clustering of short time-course microarray data with replicates
Background: There are some limitations associated with conventional clustering methods for short time-course gene expression data. The current algorithms require prior domain know...
Jihoon Kim, Ju Han Kim
BMCBI
2007
109views more  BMCBI 2007»
15 years 6 months ago
Discarding duplicate ditags in LongSAGE analysis may introduce significant error
Background: During gene expression analysis by Serial Analysis of Gene Expression (SAGE), duplicate ditags are routinely removed from the data analysis, because they are suspected...
Jeppe Emmersen, Anna M. Heidenblut, Annabeth Laurs...
ICASSP
2009
IEEE
16 years 20 days ago
Microarray classification using block diagonal linear discriminant analysis with embedded feature selection
In this paper, block diagonal linear discriminant analysis (BDLDA) is improved and applied to gene expression data. BDLDA is a classification tool with embedded feature selection...
Lingyan Sheng, Roger Pique-Regi, Shahab Asgharzade...
DILS
2005
Springer
15 years 11 months ago
Hybrid Integration of Molecular-Biological Annotation Data
: We present a new approach to integrate annotation data from public sources for the expression analysis of genes and proteins. Expression data is materialized in a data warehouse ...
Toralf Kirsten, Hong Hai Do, Christine Körner...
BMCBI
2008
121views more  BMCBI 2008»
15 years 6 months ago
Stability of gene contributions and identification of outliers in multivariate analysis of microarray data
Background: Multivariate ordination methods are powerful tools for the exploration of complex data structures present in microarray data. These methods have several advantages com...
Florent Baty, Daniel Jaeger, Frank Preiswerk, Mart...