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BMCBI
2007
215views more  BMCBI 2007»
13 years 7 months ago
Learning causal networks from systems biology time course data: an effective model selection procedure for the vector autoregres
Background: Causal networks based on the vector autoregressive (VAR) process are a promising statistical tool for modeling regulatory interactions in a cell. However, learning the...
Rainer Opgen-Rhein, Korbinian Strimmer
BMCBI
2007
135views more  BMCBI 2007»
13 years 7 months ago
Automatic extraction of reliable regions from multiple sequence alignments
Background: High quality multiple alignments are crucial in the transfer of annotation from one genome to another. Multiple alignment methods strive to achieve ever increasing lev...
Timo Lassmann, Erik L. L. Sonnhammer
JCC
2008
88views more  JCC 2008»
13 years 7 months ago
A self-organizing algorithm for molecular alignment and pharmacophore development
Abstract: We present a method for simultaneous three-dimensional (3D) structure generation and pharmacophorebased alignment using a self-organizing algorithm called Stochastic Prox...
Deepak Bandyopadhyay, Dimitris K. Agrafiotis
JCM
2006
126views more  JCM 2006»
13 years 7 months ago
A Multicast Transport Protocol Design Methodology: Analysis, Implementation and Performance Evaluation
In this paper, we propose and analyze a multicast application called SOMA (SynchrOnous Multicast Application) which offers multicast file transfer service in an asymmetric intra-ca...
Pilar Manzanares-Lopez, Juan Carlos Sanchez-Aarnou...
JCP
2006
151views more  JCP 2006»
13 years 7 months ago
Simulated Annealing based Wireless Sensor Network Localization
In this paper, we describe a novel localization algorithm for ad hoc wireless sensor networks. Accurate selforganization and localization capability is a highly desirable character...
Anushiya A. Kannan, Guoqiang Mao, Branka Vucetic