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» DIP: the Database of Interacting Proteins
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NAR
2011
241views Computer Vision» more  NAR 2011»
13 years 3 months ago
PRIDB: a protein-RNA interface database
The Protein–RNA Interface Database (PRIDB) is a comprehensive database of protein–RNA interfaces extracted from complexes in the Protein Data Bank (PDB). It is designed to fac...
Benjamin A. Lewis, Rasna R. Walia, Michael Terribi...
BMCBI
2010
119views more  BMCBI 2010»
13 years 8 months ago
Functional classification of proteins based on projection of amino acid sequences: application for prediction of protein kinase
Background: The knowledge about proteins with specific interaction capacity to the protein partners is very important for the modeling of cell signaling networks. However, the exp...
Boris Sobolev, Dmitry Filimonov, Alexey Lagunin, A...
DEXAW
2005
IEEE
96views Database» more  DEXAW 2005»
14 years 2 months ago
Mining Complex Patterns from Protein Surfaces
In the domain of bioinformatics, the role played in the biological process by proteins, that act as transmitters and receivers of information thus ruling the mechanisms that deter...
Lorenzo Baldacci, Matteo Golfarelli
NAR
2011
191views Computer Vision» more  NAR 2011»
12 years 11 months ago
ConsensusPathDB: toward a more complete picture of cell biology
ConsensusPathDB is a meta-database that integrates different types of functional interactions from heterogeneous interaction data resources. Physical protein interactions, metabol...
Atanas Kamburov, Konstantin Pentchev, Hanna Galick...
CSWWS
2006
14 years 8 days ago
A Distributed Agent System upon Semantic Web Technologies to Provide Biological Data
Bioinformaticians are accustomed to going through analysis steps, in which they employ several data sources, like protein sequence and protein interaction databases, to carry out t...
Farzad Kohantorabi, Gregory Butler, Christopher J....