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» DNA Computing Approach to Construction of Semantic Model
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BMCBI
2007
159views more  BMCBI 2007»
13 years 11 months ago
Computational genes: a tool for molecular diagnosis and therapy of aberrant mutational phenotype
Background: A finite state machine manipulating information-carrying DNA strands can be used to perform autonomous molecular-scale computations at the cellular level. Results: We ...
Israel Mark Martínez-Pérez, Gong Zha...
AI
2003
Springer
14 years 4 months ago
Hybrid Randomised Neighbourhoods Improve Stochastic Local Search for DNA Code Design
Sets of DNA strands that satisfy combinatorial constraints play an important role in various approaches to biomolecular computation, nanostructure design, and molecular tagging. Th...
Dan C. Tulpan, Holger H. Hoos
ACL
2009
13 years 8 months ago
Employing Topic Models for Pattern-based Semantic Class Discovery
A semantic class is a collection of items (words or phrases) which have semantically peer or sibling relationship. This paper studies the employment of topic models to automatical...
Huibin Zhang, Mingjie Zhu, Shuming Shi, Ji-Rong We...
ICASSP
2008
IEEE
14 years 5 months ago
Modeling regulatory sites with higher order position-dependent weight matrices
Identification of regulatory signals in DNA depends on the nature and quality of the patterns of representative sequences. These patterns are constructed from training sets of se...
Hossein Zare, Mostafa Kaveh, Arkady B. Khodursky
SMC
2010
IEEE
202views Control Systems» more  SMC 2010»
13 years 9 months ago
Evaluating the performance of nonnegative matrix factorization for constructing semantic spaces: Comparison to latent semantic a
—This study examines the ability of nonnegative matrix factorization (NMF) as a method for constructing semantic spaces, in which the meaning of each word is represented by a hig...
Akira Utsumi