Background: DNA sequence comparison is a well-studied problem, in which two DNA sequences are compared using a weighted edit distance. Recent DNA sequencing technologies however o...
Background: Copy number aberrations (CNAs) are an important molecular signature in cancer initiation, development, and progression. However, these aberrations span a wide range of...
Next-generation sequencing (NGS) together with bisulphite conversion allows the generation of whole genome methylation maps at single-cytosine resolution. This allows studying the...
Michael Hackenberg, Guillermo Barturen, José...
A large and reliable DNA codeword library is key to the success of DNA based computing. Searching for sets of reliable DNA codewords is an NP-hard problem, which can take days on ...
Qinru Qiu, Daniel J. Burns, Prakash Mukre, Qing Wu
Reversible structures are computational units that may progress forward and backward. We study weak coherent structures that are primarily inspired by dna circuits and may be comp...