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ARC
2007
Springer
123views Hardware» more  ARC 2007»
14 years 1 days ago
Multiple Sequence Alignment Using Reconfigurable Computing
The alignment of multiple protein (or DNA) sequences is a current problem in Bioinformatics. ClustalW is the most popular heuristic algorithm for multiple sequence alignment. Pairw...
Carlos R. Erig Lima, Heitor S. Lopes, Maiko R. Mor...
PDPTA
2007
13 years 9 months ago
Software Support for Non-Numerical Computing on Multi-Core Chips
- Multi-core chips present a new computing environment that can benefit from software support for non-numerical applications. Heterogeneous cores will allow efficient sophisticated...
Jerry Potter, Howard Jay Siegel
BMCBI
2011
13 years 3 months ago
PileLine: a toolbox to handle genome position information in next-generation sequencing studies
Background: Genomic position (GP) files currently used in next-generation sequencing (NGS) studies are always difficult to manipulate due to their huge size and the lack of approp...
Daniel Glez-Peña, Gonzalo Gómez-L&oa...
RECOMB
2004
Springer
14 years 8 months ago
Finding approximate tandem repeats in genomic sequences
An efficient algorithm is presented for detecting approximate tandem repeats in genomic sequences. The algorithm is based on a flexible statistical model which allows a wide range...
Ydo Wexler, Zohar Yakhini, Yechezkel Kashi, Dan Ge...
TCBB
2010
77views more  TCBB 2010»
13 years 2 months ago
Multidimensional Profiling of Cell Surface Proteins and Nuclear Markers
Cell membrane proteins play an important role in tissue architecture and cell-cell communication. We hypothesize that segmentation and multidimensional characterization of the dist...
Ju Han, Hang Chang, Kumari L. Andarawewa, Paul Yas...