Background: Codon substitution probabilities are used in many types of molecular evolution studies such as determining Ka/Ks ratios, creating ancestral DNA sequences or aligning c...
Adrian Schneider, Gina Cannarozzi, Gaston H. Gonne...
Optical mapping is an integrated system for the analysis of single DNA molecules. It constructs restriction maps (noted as “optical map”) from individual DNA molecules present...
Haifeng Li, Anton Valouev, David C. Schwartz, Mich...
It is well known that the discrete Sierpinski triangle can be defined as the nonzero residues modulo 2 of Pascal’s triangle, and that from this definition one can easily const...
In many applications string pattern matching is one of the most intensive tasks in terms of computation time and memory accesses. Network Intrusion Detection Systems and DNA Seque...
Ivano Bonesana, Marco Paolieri, Marco D. Santambro...
Abstract. Fault-tolerance is a critical issue for biochemical computation. Recent theoretical work on algorithmic self-assembly has shown that error correcting tile sets are possib...