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BMCBI
2006
121views more  BMCBI 2006»
13 years 10 months ago
Splice site identification using probabilistic parameters and SVM classification
Background: Recent advances and automation in DNA sequencing technology has created a vast amount of DNA sequence data. This increasing growth of sequence data demands better and ...
A. K. M. A. Baten, Bill C. H. Chang, Saman K. Halg...
BIBE
2007
IEEE
129views Bioinformatics» more  BIBE 2007»
14 years 2 months ago
Statistial Analysis of nucleosome occupancy and histone modification data
Abstract-- In eukaryotic cells, genomic DNAs wrap around beadlike molecules, called nucleosomes, so as to pack more compactly in the nucleus of the cell. The nucleosome is made up ...
Guo-Cheng Yuan, Jun S. Liu
RECOMB
2008
Springer
14 years 10 months ago
A Fast, Alignment-Free, Conservation-Based Method for Transcription Factor Binding Site Discovery
As an increasing number of eukaryotic genomes are being sequenced, comparative studies aimed at detecting regulatory elements in intergenic sequences are becoming more prevalent. M...
Raluca Gordân, Leelavati Narlikar, Alexander...
DNA
2009
Springer
100views Bioinformatics» more  DNA 2009»
14 years 4 months ago
Self-assembly of the Discrete Sierpinski Carpet and Related Fractals
It is well known that the discrete Sierpinski triangle can be defined as the nonzero residues modulo 2 of Pascal’s triangle, and that from this definition one can easily const...
Steven M. Kautz, James I. Lathrop
IJFCS
2007
79views more  IJFCS 2007»
13 years 10 months ago
Intra-Molecular Template-Guided Recombination
The stichotrichous ciliates are uni-cellular organisms which undergo a series of complex unscrambling of genetic encodings. This ability to rearrange DNA to produce the correct pr...
Mark Daley, Michael Domaratzki, Alexis Morris