We show how a random mutation hill climber that does multilevel selection utilizes transposition to escape local optima on the discrete Hierarchical-If-And-Only-If (HIFF) problem....
In this paper we address the problem of finding gene regulatory networks from experimental DNA microarray data. We focus on the evaluation of the performance of different mathemat...
In this paper, we present a new system, called GeneScout, for predicting gene structures in vertebrate genomic DNA. The system contains specially designed hidden Markov models (HM...
Extracting motifs from a set of DNA sequences is important in computational biology. Occurrence probability is a common used statistics to evaluate the statistical significance of...
Approximate string matching on large DNA sequences data is very important in bioinformatics. Some studies have shown that suffix tree is an efficient data structure for approxim...