Next Generation Sequencing machines are generating millions of short DNA sequences (reads) everyday. There is a need for efficient algorithms to map these sequences to the referen...
Sanchit Misra, Ramanathan Narayanan, Simon Lin, Al...
Background: The design of long oligonucleotides for spotted DNA microarrays requires detailed attention to ensure their optimal performance in the hybridization process. The main ...
: Probabilistic models for biological sequences (DNA and proteins) are frequently used in bioinformatics. We describe statistical tests designed to detect the order of dependency a...
We propose a method that rates the suitability of given templates for template-based tracking in real-time. This is important for applications with online template selection, such...
Frequent Pattern Mining (FPM) is a very powerful paradigm for mining informative and useful patterns in massive, complex datasets. In this paper we propose the Data Mining Templat...
Mohammed Javeed Zaki, Nilanjana De, Feng Gao, Paol...