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GIL
2009
13 years 5 months ago
A Software Package for Managing and Evaluating DNA Sequence and Microsatellite Data
Abstract: We have surveyed three molecular biology labs in Germany and Vietnam to evaluate practical problems in the management of molecular genetics data. These labs are generatin...
Truong Van Chi Cong, Zhivko Duchev, Eildert Groene...
BMCBI
2010
169views more  BMCBI 2010»
13 years 7 months ago
eCOMPAGT integrates mtDNA: import, validation and export of mitochondrial DNA profiles for population genetics, tumour dynamics
Background: Mitochondrial DNA (mtDNA) is widely being used for population genetics, forensic DNA fingerprinting and clinical disease association studies. The recent past has uncov...
Hansi Weißensteiner, Sebastian Schönher...
RECOMB
2004
Springer
14 years 8 months ago
Designing multiple simultaneous seeds for DNA similarity search
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
Yanni Sun, Jeremy Buhler
BMCBI
2010
108views more  BMCBI 2010»
13 years 7 months ago
An intuitionistic approach to scoring DNA sequences against transcription factor binding site motifs
Background: Transcription factors (TFs) control transcription by binding to specific regions of DNA called transcription factor binding sites (TFBSs). The identification of TFBSs ...
Fernando Garcia-Alcalde, Armando Blanco, Adrian J....
ICANNGA
2007
Springer
14 years 1 months ago
DNA Based Evolutionary Approach for Microprocessor Design Automation
In a paper [1] presented to BICS 2006, a basic methodology for microprocessor design automation using DNA sequences was proposed. A refined methodology with new schemes for travers...
Nagarajan Venkateswaran, Arjun Kumeresh, Harish Ch...