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» DPRml: distributed phylogeny reconstruction by maximum likel...
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IPPS
2009
IEEE
14 years 4 months ago
Exploring FPGAs for accelerating the phylogenetic likelihood function
Driven by novel biological wet lab techniques such as pyrosequencing there has been an unprecedented molecular data explosion over the last 2-3 years. The growth of biological seq...
Nikolaos Alachiotis, Euripides Sotiriades, Apostol...
BMCBI
2008
130views more  BMCBI 2008»
13 years 10 months ago
IDEA: Interactive Display for Evolutionary Analyses
Background: The availability of complete genomic sequences for hundreds of organisms promises to make obtaining genome-wide estimates of substitution rates, selective constraints ...
Amy Egan, Anup Mahurkar, Jonathan Crabtree, Jonath...
CVPR
2004
IEEE
14 years 1 months ago
Motion Without Correspondence from Tomographic Projections by Bayesian Inversion Theory
In conventional tomography, the interior of an object is reconstructed from tomographic projections such as X-ray or electron microscope images. All the current reconstruction met...
Sami S. Brandt, Ville Kolehmainen
ITCC
2000
IEEE
14 years 2 months ago
Dequantization Bias for JPEG Decompression
Standard JPEG decompression reconstructs quantized DCT coefficients to the center of the quantization bin. This fails to exploit the nonuniform distribution of the AC coefficien...
Jeffery R. Price, Majid Rabbani
IPPS
2007
IEEE
14 years 4 months ago
RAxML-Cell: Parallel Phylogenetic Tree Inference on the Cell Broadband Engine
Computational phylogeny is a challenging application even for the most powerful supercomputers. It is also an ideal candidate for benchmarking emerging multiprocessor architecture...
Filip Blagojevic, Alexandros Stamatakis, Christos ...