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» Data Management for High-Throughput Genomics
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JIB
2007
89views more  JIB 2007»
13 years 7 months ago
A Methodology for Comparative Functional Genomics
The continuing and rapid increase in the number of fully sequenced genomes is creating new opportunities for comparative studies. However, although many genomic databases store da...
Intikhab Alam, Mike Cornell, Darren M. Soanes, Cor...
TPCTC
2010
Springer
147views Hardware» more  TPCTC 2010»
13 years 2 months ago
Assessing and Optimizing Microarchitectural Performance of Event Processing Systems
Abstract. Event Processing (EP) systems are being progressively used in business critical applications in domains such as algorithmic trading, supply chain management, production m...
Marcelo R. N. Mendes, Pedro Bizarro, Paulo Marques
BMCBI
2004
228views more  BMCBI 2004»
13 years 7 months ago
An XML standard for the dissemination of annotated 2D gel electrophoresis data complemented with mass spectrometry results
Background: Many proteomics initiatives require a seamless bioinformatics integration of a range of analytical steps between sample collection and systems modeling immediately ass...
Romesh Stanislaus, Liu Hong Jiang, Martha Swartz, ...
FBIT
2007
IEEE
14 years 1 months ago
Unsupervised Learning in Spectral Genome Analysis
The tree representation as a model for organismal evolution has been in use since before Darwin. However, with the recent unprecedented access to biomolecular data it has been dis...
Lutz Hamel, Neha Nahar, Maria S. Poptsova, Olga Zh...
SC
2009
ACM
14 years 2 months ago
Highly scalable genome assembly on campus grids
Bioinformatics researchers need efficient means to process large collections of sequence data. One application of interest, genome assembly, has great potential for parallelizati...
Christopher Moretti, Michael Olson, Scott J. Emric...