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» Data Management for High-Throughput Genomics
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BMCBI
2006
125views more  BMCBI 2006»
13 years 7 months ago
Development of an open source laboratory information management system for 2-D gel electrophoresis-based proteomics workflow
Background: In the post-genome era, most research scientists working in the field of proteomics are confronted with difficulties in management of large volumes of data, which they...
Hiraku Morisawa, Mikako Hirota, Tosifusa Toda
BMCBI
2006
115views more  BMCBI 2006»
13 years 7 months ago
MitoRes: a resource of nuclear-encoded mitochondrial genes and their products in Metazoa
Background: Mitochondria are sub-cellular organelles that have a central role in energy production and in other metabolic pathways of all eukaryotic respiring cells. In the last f...
Domenico Catalano, Flavio Licciulli, Antonio Turi,...
BMCBI
2004
102views more  BMCBI 2004»
13 years 7 months ago
FRAGS: estimation of coding sequence substitution rates from fragmentary data
Background: Rates of substitution in protein-coding sequences can provide important insights into evolutionary processes that are of biomedical and theoretical interest. Increased...
Estienne C. Swart, Winston A. Hide, Cathal Seoighe
CLUSTER
2010
IEEE
12 years 11 months ago
Middleware support for many-task computing
Many-task computing aims to bridge the gap between two computing paradigms, high throughput computing and high performance computing. Many-task computing denotes highperformance co...
Ioan Raicu, Ian T. Foster, Mike Wilde, Zhao Zhang,...
HPDC
2003
IEEE
14 years 23 days ago
Optimizing GridFTP through Dynamic Right-Sizing
In this paper, we describe the integration of dynamic right-sizing — an automatic and scalable buffer management technique for enhancing TCP performance — into GridFTP, a sub...
Sunil Thulasidasan, Wu-chun Feng, Mark K. Gardner