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» Data Management for High-Throughput Genomics
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APBC
2003
138views Bioinformatics» more  APBC 2003»
13 years 8 months ago
A New Approach to Protein Structure and Function Analysis Using Semi-structured Databases
The development of high-throughput genome sequencing and protein structure determination techniques have provided researchers with a wealth of biological data. Integrated analysis...
William M. Shui, Raymond K. Wong, Stephen C. Graha...
BMCBI
2007
108views more  BMCBI 2007»
13 years 7 months ago
Design and implementation of a generalized laboratory data model
Background: Investigators in the biological sciences continue to exploit laboratory automation methods and have dramatically increased the rates at which they can generate data. I...
Michael C. Wendl, Scott Smith, Craig S. Pohl, Davi...
SIGCOMM
2005
ACM
14 years 1 months ago
Fast hash table lookup using extended bloom filter: an aid to network processing
Hash table is used as one of the fundamental modules in several network processing algorithms and applications such as route lookup, packet classification, per-flow state manage...
Haoyu Song, Sarang Dharmapurikar, Jonathan S. Turn...
ICOODB
2010
117views Database» more  ICOODB 2010»
13 years 6 months ago
iBLOB: Complex Object Management in Databases through Intelligent Binary Large Objects
Abstract. New emerging applications including genomic, multimedia, and geospatial technologies have necessitated the handling of complex application objects that are highly structu...
Tao Chen, Arif Khan, Markus Schneider, Ganesh Visw...
SIGMOD
2011
ACM
150views Database» more  SIGMOD 2011»
12 years 10 months ago
WHAM: a high-throughput sequence alignment method
Over the last decade the cost of producing genomic sequences has dropped dramatically due to the current so called “next-gen” sequencing methods. However, these next-gen seque...
Yinan Li, Allison Terrell, Jignesh M. Patel