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BMCBI
2005
84views more  BMCBI 2005»
13 years 8 months ago
Information theory-based algorithm for in silico prediction of PCR products with whole genomic sequences as templates
Background: A new algorithm for assessing similarity between primer and template has been developed based on the hypothesis that annealing of primer to template is an information ...
Youfang Cao, Lianjie Wang, Kexue Xu, Chunhai Kou, ...
TIT
2008
72views more  TIT 2008»
13 years 8 months ago
On the Construction of (Explicit) Khodak's Code and Its Analysis
Variable-to-variable codes are very attractive yet not well understood data compression schemes. In 1972 Khodak claimed to provide upper and lower bounds for the achievable redund...
Yann Bugeaud, Michael Drmota, Wojciech Szpankowski
BMCBI
2005
115views more  BMCBI 2005»
13 years 8 months ago
MPrime: efficient large scale multiple primer and oligonucleotide design for customized gene microarrays
Background: Enhancements in sequencing technology have recently yielded assemblies of large genomes including rat, mouse, human, fruit fly, and zebrafish. The availability of larg...
Eric C. Rouchka, Abdelnaby Khalyfa, Nigel G. F. Co...
BMCBI
2005
156views more  BMCBI 2005»
13 years 8 months ago
A new dynamical layout algorithm for complex biochemical reaction networks
Background: To study complex biochemical reaction networks in living cells researchers more and more rely on databases and computational methods. In order to facilitate computatio...
Katja Wegner, Ursula Kummer
BMCBI
2005
125views more  BMCBI 2005»
13 years 8 months ago
A simple approach for protein name identification: prospects and limits
Background: Significant parts of biological knowledge are available only as unstructured text in articles of biomedical journals. By automatically identifying gene and gene produc...
Katrin Fundel, Daniel Güttler, Ralf Zimmer, J...
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