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» Data parallelism in bioinformatics workflows using Hydra
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BMCBI
2011
12 years 11 months ago
Biomarker Discovery and Redundancy Reduction towards Classification using a Multi-factorial MALDI-TOF MS T2DM Mouse Model Datase
Background: Diabetes like many diseases and biological processes is not mono-causal. On the one hand multifactorial studies with complex experimental design are required for its c...
Chris Bauer, Frank Kleinjung, Celia J. Smith, Mark...
BIOINFORMATICS
2012
11 years 10 months ago
MolClass: a web portal to interrogate diverse small molecule screen datasets with different computational models
Summary: The MolClass toolkit and data portal generates computational models from user-defined small molecule datasets based on structural features identified in hit and non-hit m...
Jan Wildenhain, Nicholas FitzGerald, Mike Tyers
IPPS
2006
IEEE
14 years 1 months ago
Speeding up NGB with distributed file streaming framework
Grid computing provides a very rich environment for scientific calculations. In addition to the challenges it provides, it also offers new opportunities for optimization. In this ...
Bingchen Li, Kang Chen, Zhiteng Huang, H. L. Rajic...
CCGRID
2006
IEEE
13 years 11 months ago
Evaluating Provenance-based Trust for Scientific Workflows
Provenance is the documentation concerning the origin of a result generated by a process, and provides explanations about who, how, what resources were used in a process, and the ...
Shrija Rajbhandari, Ian Wootten, Ali Shaikh Ali, O...
SC
2009
ACM
14 years 4 days ago
Plasma fusion code coupling using scalable I/O services and scientific workflows
In order to understand the complex physics of mother nature, physicist often use many approximations to understand one area of physics and then write a simulation to reduce these ...
Norbert Podhorszki, Scott Klasky, Qing Liu, Cipria...