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» Dependency-Based Relation Mining for Biomedical Literature
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BMCBI
2005
189views more  BMCBI 2005»
13 years 9 months ago
A sentence sliding window approach to extract protein annotations from biomedical articles
Background: Within the emerging field of text mining and statistical natural language processing (NLP) applied to biomedical articles, a broad variety of techniques have been deve...
Martin Krallinger, Maria Padron, Alfonso Valencia
CIT
2004
Springer
14 years 1 months ago
BioPubMiner: Machine Learning Component-Based Biomedical Information Analysis Platform
Abstract. In this paper we introduce BioPubMiner, a machine learning component-based platform for biomedical information analysis. BioPubMiner employs natural language processing t...
Jae-Hong Eom, Byoung-Tak Zhang
BMCBI
2005
143views more  BMCBI 2005»
13 years 9 months ago
Evaluation of BioCreAtIvE assessment of task 2
Background: Molecular Biology accumulated substantial amounts of data concerning functions of genes and proteins. Information relating to functional descriptions is generally extr...
Christian Blaschke, Eduardo Andrés Le&oacut...
BMCBI
2010
110views more  BMCBI 2010»
13 years 9 months ago
Concept-based query expansion for retrieving gene related publications from MEDLINE
Background: Advances in biotechnology and in high-throughput methods for gene analysis have contributed to an exponential increase in the number of scientific publications in thes...
Sérgio Matos, Joel Arrais, João Maia...
IWANN
2009
Springer
14 years 4 months ago
Identifying Gene Ontology Areas for Automated Enrichment
Biomedical ontologies provide a commonly accepted scheme for the characterization of biological concepts that enable knowledge sharing and integration. Updating and maintaining an ...
Catia Pesquita, Tiago Grego, Francisco M. Couto