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BMCBI
2007
112views more  BMCBI 2007»
13 years 7 months ago
PFAAT version 2.0: A tool for editing, annotating, and analyzing multiple sequence alignments
Background: By virtue of their shared ancestry, homologous sequences are similar in their structure and function. Consequently, multiple sequence alignments are routinely used to ...
Daniel R. Caffrey, Paul H. Dana, Vidhya Mathur, Ma...
PDP
2006
IEEE
14 years 1 months ago
An Experimental Validation of the PRO Model for Parallel and Distributed Computation
— The Parallel Resource-Optimal (PRO) computation model was introduced by Gebremedhin et al. [2002] as a framework for the design and analysis of efficient parallel algorithms. ...
Mohamed Essaïdi, Jens Gustedt
FPL
2004
Springer
109views Hardware» more  FPL 2004»
14 years 28 days ago
Hardware Accelerated Novel Protein Identification
The proteins in living organisms perform almost every significant function that governs life. A protein's functionality depends upon its physical structure, which depends on i...
Anish Alex, Jonathan Rose, Ruth Isserlin-Weinberge...
CEC
2009
IEEE
14 years 2 months ago
Evolving modular neural-networks through exaptation
— Despite their success as optimization methods, evolutionary algorithms face many difficulties to design artifacts with complex structures. According to paleontologists, living...
Jean-Baptiste Mouret, Stéphane Doncieux
BIBM
2008
IEEE
105views Bioinformatics» more  BIBM 2008»
14 years 2 months ago
Energy Profile and Secondary Structure Impact shRNA Efficacy
Many characteristics of functional synthetic siRNAs have been identified. Our three-phase algorithm was developed to design siRNA on a wholegenome scale based on these characteris...
Hong Zhou, Xiao Zeng