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» Design of DNA origami
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DAM
2006
61views more  DAM 2006»
13 years 6 months ago
On error-tolerant DNA screening
Given n clones with some positive ones, the problem of DNA screening is to identify all positive clones with a set of tests each on a subset of clones, called a pool and the outco...
Weili Wu, Yaochun Huang, Xiao Huang, Yingshu Li
BIB
2008
88views more  BIB 2008»
13 years 6 months ago
MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
The Molecular Evolutionary Genetics Analysis (MEGA) software is a desktop application designed for comparative analysis of homologous gene sequences either from multigene families...
Sudhir Kumar, Masatoshi Nei, Joel Dudley, Koichiro...
BMCBI
2010
190views more  BMCBI 2010»
13 years 6 months ago
A parallel and incremental algorithm for efficient unique signature discovery on DNA databases
Background: DNA signatures are distinct short nucleotide sequences that provide valuable information that is used for various purposes, such as the design of Polymerase Chain Reac...
Hsiao Ping Lee, Tzu-Fang Sheu, Chuan Yi Tang
BMCBI
2004
146views more  BMCBI 2004»
13 years 6 months ago
The InDeVal insertion/deletion evaluation tool: a program for finding target regions in DNA sequences and for aiding in sequence
Background: The program InDeVal was originally developed to help researchers find known regions of insertion/deletion activity (with the exception of isolated single-base indels) ...
Sierra D. Stoneberg Holt, Jason A. Holt
INFOSCALE
2006
ACM
14 years 21 days ago
Scalable hardware accelerator for comparing DNA and protein sequences
Abstract— Comparing genetic sequences is a well-known problem in bioinformatics. Newly determined sequences are being compared to known sequences stored in databases in order to ...
Philippe Faes, Bram Minnaert, Mark Christiaens, Er...