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» Design of DNA origami
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RECOMB
2002
Springer
14 years 7 months ago
String barcoding: uncovering optimal virus signatures
There are many critical situations when one needs to rapidly identify an unidentified pathogen from among a given set of previously sequenced pathogens. DNA or RNA hybridization c...
Sam Rash, Dan Gusfield
GCB
2006
Springer
158views Biometrics» more  GCB 2006»
13 years 11 months ago
Microarray Layout as Quadratic Assignment Problem
Abstract: The production of commercial DNA microarrays is based on a light-directed chemical synthesis driven by a set of masks or micromirror arrays. Because of the natural proper...
Sérgio A. de Carvalho, Sven Rahmann
DAM
2007
91views more  DAM 2007»
13 years 7 months ago
Integer linear programming approaches for non-unique probe selection
In addition to their prevalent use for analyzing gene expression, DNA microarrays are an efficient tool for biological, medical, and industrial applications because of their abil...
Gunnar W. Klau, Sven Rahmann, Alexander Schliep, M...
IJBRA
2006
107views more  IJBRA 2006»
13 years 7 months ago
Probabilistic models for biological sequences: selection and Maximum Likelihood estimation
: Probabilistic models for biological sequences (DNA and proteins) are frequently used in bioinformatics. We describe statistical tests designed to detect the order of dependency a...
Svetlana Ekisheva, Mark Borodovsky
ICCAD
2004
IEEE
124views Hardware» more  ICCAD 2004»
14 years 4 months ago
Architectural-level synthesis of digital microfluidics-based biochips
Microfluidics-based biochips offer a promising platform for massively parallel DNA analysis, automated drug discovery, and real-time biomolecular recognition. Current techniques f...
Fei Su, Krishnendu Chakrabarty