In this paper we present an evolutionary approach for inferring the structure and dynamics in gene circuits from observed expression kinetics. For representing the regulatory inte...
Embedded Cartesian Genetic Programming (ECGP) is an extension of Cartesian Genetic Programming (CGP) that can automatically acquire, evolve and re-use partial solutions in the for...
James Alfred Walker, Julian Francis Miller, Rachel...
This contribution is the first to discover exploitable structural features within circuit optimization problems (COP) and discuss how it is indicative of a general structure and ...
Background: To infer homology and subsequently gene function, the Smith-Waterman (SW) algorithm is used to find the optimal local alignment between two sequences. When searching s...
It is argued that natural evolution is, par excellence, an algorithm that exploits the physical properties of materials. Such an exploitation of the physical characteristics has a...