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BMCBI
2010
151views more  BMCBI 2010»
13 years 7 months ago
TF-finder: A software package for identifying transcription factors involved in biological processes using microarray data and e
Background: Identification of transcription factors (TFs) involved in a biological process is the first step towards a better understanding of the underlying regulatory mechanisms...
Xiaoqi Cui, Tong Wang, Huann-Sheng Chen, Victor Bu...
RECOMB
2007
Springer
14 years 7 months ago
QNet: A Tool for Querying Protein Interaction Networks
Molecular interaction databases can be used to study the evolution of molecular pathways across species. Querying such pathways is a challenging computational problem, and recent e...
Banu Dost, Tomer Shlomi, Nitin Gupta 0002, Eytan R...
EDBT
2010
ACM
156views Database» more  EDBT 2010»
13 years 11 months ago
Pattern detector: fast detection of suspicious stream patterns for immediate reaction
Detecting emerging problems in information and manufacturing systems is the goal of monitoring tools. Good and timely detection of problematic conditions from measured indicators ...
Ira Assent, Hardy Kremer, Stephan Günnemann, ...
BMCBI
2006
147views more  BMCBI 2006»
13 years 7 months ago
QPath: a method for querying pathways in a protein-protein interaction network
Background: Sequence comparison is one of the most prominent tools in biological research, and is instrumental in studying gene function and evolution. The rapid development of hi...
Tomer Shlomi, Daniel Segal, Eytan Ruppin, Roded Sh...
BIOSYSTEMS
2008
130views more  BIOSYSTEMS 2008»
13 years 7 months ago
Biological networks in metabolic P systems
The metabolic P algorithm is a procedure which determines, in a biochemically realistic way, the evolution of P systems representing biological phenomena. A new formulation of thi...
Vincenzo Manca, Luca Bianco