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» Detection and matching of rectilinear structures
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BMCBI
2006
120views more  BMCBI 2006»
13 years 10 months ago
Projections for fast protein structure retrieval
Background: In recent times, there has been an exponential rise in the number of protein structures in databases e.g. PDB. So, design of fast algorithms capable of querying such d...
Sourangshu Bhattacharya, Chiranjib Bhattacharyya, ...
BMCBI
2004
141views more  BMCBI 2004»
13 years 9 months ago
Estimates of statistical significance for comparison of individual positions in multiple sequence alignments
Background: Profile-based analysis of multiple sequence alignments (MSA) allows for accurate comparison of protein families. Here, we address the problems of detecting statistical...
Ruslan Sadreyev, Nick V. Grishin
CCS
2009
ACM
14 years 4 months ago
Robust signatures for kernel data structures
Kernel-mode rootkits hide objects such as processes and threads using a technique known as Direct Kernel Object Manipulation (DKOM). Many forensic analysis tools attempt to detect...
Brendan Dolan-Gavitt, Abhinav Srivastava, Patrick ...
BMCBI
2007
115views more  BMCBI 2007»
13 years 10 months ago
Local comparison of protein structures highlights cases of convergent evolution in analogous functional sites
Background: We performed an exhaustive search for local structural similarities in an ensemble of non-redundant protein functional sites. With the purpose of finding new examples ...
Gabriele Ausiello, Daniele Peluso, Allegra Via, Ma...
ASIAN
2007
Springer
102views Algorithms» more  ASIAN 2007»
14 years 4 months ago
A Static Birthmark of Binary Executables Based on API Call Structure
Abstract. A software birthmark is a unique characteristic of a program that can be used as a software theft detection. In this paper we suggest and empirically evaluate a static bi...
Seokwoo Choi, Heewan Park, Hyun-il Lim, Taisook Ha...