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BMCBI
2010
152views more  BMCBI 2010»
13 years 9 months ago
A high-throughput de novo sequencing approach for shotgun proteomics using high-resolution tandem mass spectrometry
Background: High-resolution tandem mass spectra can now be readily acquired with hybrid instruments, such as LTQ-Orbitrap and LTQ-FT, in high-throughput shotgun proteomics workflo...
Chongle Pan, Byung-Hoon Park, William H. McDonald,...
TSP
2010
13 years 3 months ago
Optimization and analysis of distributed averaging with short node memory
Distributed averaging describes a class of network algorithms for the decentralized computation of aggregate statistics. Initially, each node has a scalar data value, and the goal...
Boris N. Oreshkin, Mark Coates, Michael G. Rabbat
BMCBI
2005
122views more  BMCBI 2005»
13 years 8 months ago
Quantitative analysis of EGR proteins binding to DNA: assessing additivity in both the binding site and the protein
Background: Recognition codes for protein-DNA interactions typically assume that the interacting positions contribute additively to the binding energy. While this is known to not ...
Jiajian Liu, Gary D. Stormo
IPSN
2010
Springer
14 years 3 months ago
Consensus-based distributed linear support vector machines
This paper develops algorithms to train linear support vector machines (SVMs) when training data are distributed across different nodes and their communication to a centralized no...
Pedro A. Forero, Alfonso Cano, Georgios B. Giannak...
ICSE
2001
IEEE-ACM
14 years 1 months ago
A Framework for Multi-Valued Reasoning over Inconsistent Viewpoints
In requirements elicitation, different stakeholders often hold different views of how a proposed system should behave, resulting in inconsistencies between their descriptions. Con...
Steve M. Easterbrook, Marsha Chechik