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» Determining gene expression on a single pair of microarrays
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RECOMB
2004
Springer
14 years 7 months ago
The Statistical Significance of Max-Gap Clusters
Identifying gene clusters, genomic regions that share local similarities in gene organization, is a prerequisite for many different types of genomic analyses, including operon pred...
Rose Hoberman, David Sankoff, Dannie Durand
BMCBI
2008
131views more  BMCBI 2008»
13 years 7 months ago
Major copy proportion analysis of tumor samples using SNP arrays
Background: Single nucleotide polymorphisms (SNPs) are the most common genetic variations in the human genome and are useful as genomic markers. Oligonucleotide SNP microarrays ha...
Cheng Li, Rameen Beroukhim, Barbara A. Weir, Wendy...
BMCBI
2004
114views more  BMCBI 2004»
13 years 7 months ago
Extending the mutual information measure to rank inferred literature relationships
Background: Within the peer-reviewed literature, associations between two things are not always recognized until commonalities between them become apparent. These commonalities ca...
Jonathan D. Wren
WABI
2009
Springer
109views Bioinformatics» more  WABI 2009»
14 years 2 months ago
Fast Prediction of RNA-RNA Interaction
Regulatory antisense RNAs are a class of ncRNAs that regulate gene expression by prohibiting the translation of an mRNA by establishing stable interactions with a target sequence. ...
Raheleh Salari, Rolf Backofen, Süleyman Cenk ...
CADE
2000
Springer
13 years 12 months ago
Reasoning with Individuals for the Description Logic SHIQ
Abstract. While there has been a great deal of work on the development of reasoning algorithms for expressive description logics, in most cases only Tbox reasoning is considered. I...
Ian Horrocks, Ulrike Sattler, Stephan Tobies